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Metadata-driven Software Systems in Biomedicine (Record no. 19058)

000 -LEADER
fixed length control field 06358nam a22004335i 4500
003 - CONTROL NUMBER IDENTIFIER
control field OSt
005 - DATE AND TIME OF LATEST TRANSACTION
control field 20140310150638.0
007 - PHYSICAL DESCRIPTION FIXED FIELD--GENERAL INFORMATION
fixed length control field cr nn 008mamaa
008 - FIXED-LENGTH DATA ELEMENTS--GENERAL INFORMATION
fixed length control field 110527s2011 xxk| s |||| 0|eng d
020 ## - INTERNATIONAL STANDARD BOOK NUMBER
International Standard Book Number 9780857295101
978-0-85729-510-1
050 #4 - LIBRARY OF CONGRESS CALL NUMBER
Classification number R858-859.7
082 04 - DEWEY DECIMAL CLASSIFICATION NUMBER
Classification number 502.85
Edition number 23
264 #1 -
-- London :
-- Springer London,
-- 2011.
912 ## -
-- ZDB-2-SME
100 1# - MAIN ENTRY--PERSONAL NAME
Personal name Nadkarni, Prakash M.
Relator term author.
245 10 - IMMEDIATE SOURCE OF ACQUISITION NOTE
Title Metadata-driven Software Systems in Biomedicine
Medium [electronic resource] :
Remainder of title Designing Systems that can adapt to Changing Knowledge /
Statement of responsibility, etc by Prakash M. Nadkarni.
300 ## - PHYSICAL DESCRIPTION
Extent XX, 396 p.
Other physical details online resource.
440 1# - SERIES STATEMENT/ADDED ENTRY--TITLE
Title Health Informatics,
International Standard Serial Number 1431-1917
505 0# - FORMATTED CONTENTS NOTE
Formatted contents note 1. What is metadata? Types of metadata -- Descriptive (interpreted by humans) -- Technical (utilized by software) -- Some metadata shows characteristics of both -- How metadata is represented -- Why use metadata to build biomedical systems? Caveat: Metadata-driven systems are initially harder to build, Building for change: flexibility and maintainability, Elimination of repetitious coding tasks, Case Study: Table-driven approaches to software design -- 2. Metadata for supporting electronic medical records -- The Entity-Attribute-Value (EAV) data model: -- Why EAV is problematic without metadata-editing capabilities: the TMR experience -- Pros and Cons of EAV: When not to use EAV -- How metadata allows ad hoc query to be data-model agnostic -- Transactional operations vs. warehousing operations -- Case Study: The I2B2 clinical data warehouse model -- Providing end-user customizability, Case Study: EpicCare Flowsheets -- 3. Metadata for clinical study data management systems (CSDMS) -- Critical differences between an EMR and a CSDMS -- Essential elements of a CSDMS -- HTML-based vs. non-Web interfaces: pros and cons -- Case Study: Metadata for robust interactive data validation -- Metadata and the support of basic bioscience research -- Object dictionaries and synonyms: the NCBI Entrez approach -- Fundamentals of object-oriented modeling: the use of classes -- Case study: representing neuroscience data: SenseLab -- Case study: managing phenotype data -- 4. Descriptive Metadata: Controlled Biomedical Terminologies -- Classification of Controlled Vocabularies, with examples: Collections of Terms, Taxonomies: a hierarchical structure, Thesauri: Concepts vs. Terms, Ontologies: Classes and Properties, Cimino’s criteria for a good controlled vocabulary, Fundamentals of Description Logics, Pre-coordination vs. compositional approaches to new concept definition, Challenges when the set of permissible operations is incomplete, Difficulties in end-user employment of large vocabularies, The use of vocabulary subsets: the 95/5 problem, Case Study: the SNOMED vocabulary -- 5. Metadata and XML -- Introduction to XML -- Strengths of XML for information interchange -- Misconceptions and common pitfalls in XML use -- Weaknesses of XML as the basis for data modeling -- The Microarray Gene Expression Data (MGED) experience -- Use of the Unified Modeling Language -- UML is intended for human visualization -- UML has an internal XML equivalent (XMI) -- Case Study: Clinical text markup -- 6. Metadata and the modeling of ontologies -- Ontology modeling tools: Protégé -- Common Pitfalls in Ontology Modeling -- Scalable ontology designs -- Supporting reasoning in ontologies: classification -- An introduction to Semantic Web technologies -- Limitations: the open-world assumption -- Case Study: Implementing constraints in SNOMED -- 7. Metadata and Production-Rule Engines -- Introduction to Production-Rule Systems -- Strengths and weaknesses of rule frameworks -- Embedded rule engines -- Data that can be executed as code: the Eval function -- Designing for extensibility -- Supporting versioning -- Case Study: The Jones Criteria for Rheumatic Fever -- 8. Biomedical Metadata Standards -- Why there can be no universal standard: a metadata model is problem-specific -- Standards for Descriptive Metadata -- ISO/IEC 11179: Purpose and Limitations -- Standards for Technical Metadata -- Have been designed for individual problem domains -- CDISC for clinical study data interchange -- Interchange standards for gene expression and proteomics -- 9. The HL7 v3 Reference Information Model -- Elements of the model -- What the model is not intended to encompass -- The clinical document architecture -- The Messaging Standard: Backward Incompatibilities -- Limitations and controversies.
520 ## - SUMMARY, ETC.
Summary, etc To build good systems, one needs both good development skills as well as a thorough knowledge of the problem one is trying to solve. Knowledge of software history – what has worked and what hasn’t – also helps in these types of detailed projects. Metadata-Driven Software Systems in Biomedicine lays down some of the foundations and provides a knowledge-base to assist this process. The technical portion of the book consists of database schemas and working code that provide non-trivial examples for the practitioner who is conversant with software development and wishes to employ the approaches described in the book.  Eight of the ten chapters include case studies, while the book also includes extensible designs in biomedical applications: electronic medical records, clinical study data management systems, laboratory research support systems, ontologies, and production-rule subsystems. This book is therefore ideal for individuals who have to interact with large biomedical database systems in an information-technology or informatician capacity, build interfaces to such systems or design new systems themselves.
650 #0 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Medicine.
Topical term or geographic name as entry element Practice of medicine.
Topical term or geographic name as entry element Medical records
General subdivision Data processing.
Topical term or geographic name as entry element Medicine & Public Health.
Topical term or geographic name as entry element Health Informatics.
Topical term or geographic name as entry element Biomedicine general.
Topical term or geographic name as entry element Health Administration.
710 2# - ADDED ENTRY--CORPORATE NAME
Corporate name or jurisdiction name as entry element SpringerLink (Online service)
773 0# - HOST ITEM ENTRY
Title Springer eBooks
776 08 - ADDITIONAL PHYSICAL FORM ENTRY
Display text Printed edition:
International Standard Book Number 9780857295095
856 40 - ELECTRONIC LOCATION AND ACCESS
Uniform Resource Identifier http://dx.doi.org/10.1007/978-0-85729-510-1
942 ## - ADDED ENTRY ELEMENTS (KOHA)
Source of classification or shelving scheme
Item type E-Book
Copies
Price effective from Permanent location Date last seen Not for loan Date acquired Source of classification or shelving scheme Koha item type Damaged status Lost status Withdrawn status Current location Full call number
2014-04-03AUM Main Library2014-04-03 2014-04-03 E-Book   AUM Main Library502.85

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